MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-124-P1-v1

Family name MIR-124 (all species)
Seed AAGGCAC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-124-1
Paralogues Dno-Mir-124-P1-v2  Dno-Mir-124-P2-v1  Dno-Mir-124-P2-v2  Dno-Mir-124-P3-v1  Dno-Mir-124-P3-v2 
Orthologues Aae-Mir-124  Aca-Mir-124-P1-v1  Aca-Mir-124-P1-v2  Ami-Mir-124-P1-v1  Ami-Mir-124-P1-v2  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bla-Mir-124  Bta-Mir-124-P1-v1  Bta-Mir-124-P1-v2  Cel-Mir-124  Cfa-Mir-124-P1-v1  Cfa-Mir-124-P1-v2  Cli-Mir-124-P1-v1  Cli-Mir-124-P1-v2  Cmi-Mir-124-P1-v1  Cmi-Mir-124-P1-v2  Cpi-Mir-124-P1-v1  Cpi-Mir-124-P1-v2  Cpo-Mir-124-P1-v1  Cpo-Mir-124-P1-v2  Cte-Mir-124  Dan-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dre-Mir-124-P1a-v1  Dre-Mir-124-P1a-v2  Dre-Mir-124-P1b-v1  Dre-Mir-124-P1b-v2  Dsi-Mir-124  Dya-Mir-124  Esc-Mir-124  Ete-Mir-124-P1-v1  Ete-Mir-124-P1-v2  Gga-Mir-124-P1-v1  Gga-Mir-124-P1-v2  Gja-Mir-124-P1-v1  Gja-Mir-124-P1-v2  Gmo-Mir-124-P1a-v1  Gmo-Mir-124-P1a-v2  Gmo-Mir-124-P1b-v1  Gmo-Mir-124-P1b-v2  Hme-Mir-124  Hsa-Mir-124-P1-v1  Hsa-Mir-124-P1-v2  Isc-Mir-124  Lan-Mir-124  Lch-Mir-124-P1  Loc-Mir-124-P1-v1  Loc-Mir-124-P1-v2  Mal-Mir-124-P1a-v1  Mal-Mir-124-P1a-v2  Mal-Mir-124-P1b-v1  Mal-Mir-124-P1b-v2  Mdo-Mir-124-P1-v1  Mdo-Mir-124-P1-v2  Mml-Mir-124-P1-v1  Mml-Mir-124-P1-v2  Mmu-Mir-124-P1-v1  Mmu-Mir-124-P1-v2  Mun-Mir-124-P1-v1  Mun-Mir-124-P1-v2  Npo-Mir-124  Oan-Mir-124-P1-v1  Oan-Mir-124-P1-v2  Obi-Mir-124  Ocu-Mir-124-P1-v1  Ocu-Mir-124-P1-v2  Ovu-Mir-124  Pbv-Mir-124-P1-v1  Pbv-Mir-124-P1-v2  Pfl-Mir-124  Pma-Mir-124-o1  Pmi-Mir-124  Rno-Mir-124-P1-v1  Rno-Mir-124-P1-v2  Sha-Mir-124-P1-v1  Sha-Mir-124-P1-v2  Sko-Mir-124  Spt-Mir-124-P1  Spu-Mir-124  Sto-Mir-124-P1-v1  Sto-Mir-124-P1-v2  Tca-Mir-124  Tgu-Mir-124-P1-v1  Tgu-Mir-124-P1-v2  Tni-Mir-124-P1b-v1  Tni-Mir-124-P1b-v2  Xbo-Mir-124  Xla-Mir-124-P1c-v1  Xla-Mir-124-P1c-v2  Xla-Mir-124-P1d-v1  Xla-Mir-124-P1d-v2  Xtr-Mir-124-P1-v1  Xtr-Mir-124-P1-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(dasNov3)
JH569073: 2335337-2335395 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-124-P1-v1)
Mir-124-P1-v1 JH569073: 2335337-2335395 [+] UCSC Ensembl
Mir-124-P1-v2 JH569073: 2335337-2335394 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUACGGAUCGAGAUGAAGACUCUGCCCUCCGUGUUCACAGCGGACCUUGAUUUAAUGUCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGCGGAGCCUAUGAGCUGCACUUGACGGA
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Structure
        10          20        30        40        50         
CCUACGGAUCGAGAUGA--| A      C  CC        A   GA       UUAAUG 
                   AG CUCUGC CU  GUGUUCAC GCG  CCUUGAU      \
                   UC GAGGCG GA  CGUAAGUG CGC  GGAAUUA      U
AGGCAGUUCACGUCGAGUA^ C      A  AC        G   AC       ACAUAC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-124-P1-v1_5p*

mirBase accessionMIMAT0047612
Sequence
0- CGUGUUCACAGCGGACCUUGAU -22
Get sequence
Mature sequence

Dno-Mir-124-P1-v1_3p

mirBase accessionMIMAT0047613
Sequence
37- UAAGGCACGCGGUGAAUGCCAA -59
Get sequence