MirGeneDB 2.1
MirGeneDB ID

Dno-Mir-30-P1a

Family name MIR-30 (all species)
Seed GUAAACA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-30d
Paralogues Dno-Mir-30-P1b  Dno-Mir-30-P1d  Dno-Mir-30-P2a  Dno-Mir-30-P2b  Dno-Mir-30-P2d 
Orthologues Aca-Mir-30-P1a  Ami-Mir-30-P1a  Bta-Mir-30-P1a  Cfa-Mir-30-P1a  Cli-Mir-30-P1a  Cmi-Mir-30-P1a  Cpi-Mir-30-P1a  Cpo-Mir-30-P1a  Dre-Mir-30-P1a  Ete-Mir-30-P1a  Gga-Mir-30-P1a  Gja-Mir-30-P1a  Gmo-Mir-30-P1a  Hsa-Mir-30-P1a  Lch-Mir-30-P1a  Loc-Mir-30-P1a  Mal-Mir-30-P1a  Mdo-Mir-30-P1a  Mml-Mir-30-P1a  Mmu-Mir-30-P1a  Mun-Mir-30-P1a  Oan-Mir-30-P1a  Ocu-Mir-30-P1a  Pbv-Mir-30-P1a  Rno-Mir-30-P1a  Sha-Mir-30-P1a  Spt-Mir-30-P1a  Sto-Mir-30-P1a  Tgu-Mir-30-P1a  Tni-Mir-30-P1a  Xla-Mir-30-P1a1  Xla-Mir-30-P1a2  Xtr-Mir-30-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)		 JH569858: 1749094-1749156 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-30-P1a)		 Mir-30-P2a JH569858: 1744469-1744528 [-] UCSC Ensembl
Mir-30-P1a JH569858: 1749094-1749156 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUUAAUUUCUUGUUCAGAAAGUCUGUUGUUGUAAACAUCCCCGACUGGAAGCUGUAAAGAUACAACUAAGCUUUCAGUCAGAUGUUUGCUGCUACCGGCUGUUCACGGACAUCACCUUGUUA
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Structure
        10         20         30        40        50        60  
CGUUAAUUUCUUGUUCA-   -|   U  U  U         CCC           GUAAAGA 
                  GAA AGUC GU GU GUAAACAUC   GACUGGAAGCU       \
                  CUU UCGG CA CG CGUUUGUAG   CUGACUUUCGA       U
AUUGUUCCACUACAGGCA   G^   C  U  U         A--           AUCAACA 
 120       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-30-P1a_5p
mirBase accessionMIMAT0047563
Sequence 
0- UGUAAACAUCCCCGACUGGAAGCU -24
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Star sequence

Dno-Mir-30-P1a_3p*
mirBase accessionMIMAT0047564
Sequence 
41- CUUUCAGUCAGAUGUUUGCUGC -63
Get sequence