MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-450-P2

Family name MIR-450 (all species)
Seed UUUGCGA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-450a
Paralogues Dno-Mir-450-P1  Dno-Mir-450-P3 
Orthologues Bta-Mir-450-P2  Cfa-Mir-450-P2  Cpo-Mir-450-P2  Hsa-Mir-450-P2  Mml-Mir-450-P2  Mmu-Mir-450-P2  Ocu-Mir-450-P2  Rno-Mir-450-P2a  Rno-Mir-450-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH573198: 468989-469045 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P2)
Mir-15-P1c JH573198: 462451-462509 [+] UCSC Ensembl
Mir-15-P2c JH573198: 462819-462881 [+] UCSC Ensembl
Mir-542-v1 JH573198: 468016-468075 [+] UCSC Ensembl
Mir-542-v2 JH573198: 468017-468074 [+] UCSC Ensembl
Mir-450-P1 JH573198: 468836-468892 [+] UCSC Ensembl
Mir-450-P2 JH573198: 468989-469045 [+] UCSC Ensembl
Mir-450-P3 JH573198: 469158-469215 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUAUAGGCAAAGAAAGAUGCUAAACUAUUUUUGCGAUGUGUUCCUAAUAUGCAGUAUAAAUAUAUUGGGAACAUUUUGCAUAUGUAGUUUUGUAUCAAUAUACAGACCAAAGGCU
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Structure
        10          20        30        40        50        
CAUUAUAGGCAAAGAAA--|    U       UUU     U             GCAGU 
                   GAUGC AAACUAU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGAUG   ACGUU UACAAGGGUUAUA     A
UCGGAAACCAGACAUAUAA^    U       UAU     U             UAAAU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Dno-Mir-450-P2_5p

mirBase accessionMIMAT0047897
Sequence
0- UUUUGCGAUGUGUUCCUAAUAU -22
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Star sequence

Dno-Mir-450-P2_3p*

mirBase accessionMIMAT0047898
Sequence
35- AUUGGGAACAUUUUGCAUAUGU -57
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