MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-2-P2b2

Family name MIR-2 (all species)
Seed AUCACAG
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-13b-2
Paralogues Dya-Mir-2-P1-v1  Dya-Mir-2-P1-v2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P3a  Dya-Mir-2-P3b  Dya-Mir-2-P4a-v1  Dya-Mir-2-P4a-v2  Dya-Mir-2-P4b-v1  Dya-Mir-2-P4b-v2  Dya-Mir-2-P5  Dya-Mir-2-P6a  Dya-Mir-2-P6b  Dya-Mir-2-P6c  Dya-Mir-2-P7  Dya-Mir-2-P8  Dya-Mir-2-P9-v1  Dya-Mir-2-P9-v2 
Orthologues Aae-Mir-2-P2  Bge-Mir-2-P2  Dan-Mir-2-P2b2  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2b2  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2b2 
Node of Origin (locus) Drosophila
Node of Origin (family) Protostomia
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
X: 12330569-12330629 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUCGUCGCUUACCCCUGCUGUCUAGUAACGCGUCAAAAUGACUGUGAGCUAUGUGGAUUUGACUUCAUAUCACAGCCAUUUUGACGAGUUUGCUGGCCAGUCUCAUCAUCGUGAAAAGUC
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Structure
        10          20         30        40        50        60
ACUCGUCGCUUACCCCU--    U     -|  G          A      GC    UGGAU 
                   GCUG CUAGU AAC CGUCAAAAUG CUGUGA  UAUG     U
                   UGAC GGUCG UUG GCAGUUUUAC GACACU  AUAC     U
CUGAAAAGUGCUACUACUC    C     U^  A          C      --    UUCAG 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-2-P2b2_5p*

mirBase accessionNone
Sequence
0- GCGUCAAAAUGACUGUGAGCUAUG -24
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Mature sequence

Dya-Mir-2-P2b2_3p

mirBase accessionMIMAT0009056
Sequence
38- UAUCACAGCCAUUUUGACGAGUU -61
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