MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-964-v2

Family name MIR-964 (all species)
Seed AGAAUAG
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues Dya-Mir-964-v1 
Orthologues Dan-Mir-964  Dme-Mir-964-v2  Dmo-Mir-964  Dsi-Mir-964-v2 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2L: 13551084-13551142 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUCAAUGAAAUCUUGGUCCCACUUGUCUUAGAAUAGGGGAGCUUAACUUAUGUAUAUCAUGUAUAAGUUAAGAACCUUUAUUCUAAGACAAUUCGACUACAAAAUCAACUGAAAAAC
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Structure
        10           20        30        40        50         
CAAUCAAUGAAAUCUUG---|  CCAC                 AG         UGUAUA 
                    GUC    UUGUCUUAGAAUAGGGG  CUUAACUUA      \
                    CAG    AACAGAAUCUUAUUUCC  GAAUUGAAU      U
CAAAAAGUCAACUAAAACAU^  CUU-                 AA         AUGUAC 
       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-964-v2_5p

mirBase accessionNone
Sequence
0- UAGAAUAGGGGAGCUUAACUUA -22
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Star sequence

Dya-Mir-964-v2_3p* (predicted)

mirBase accessionNone
Sequence
37- AGUUAAGAACCUUUAUUCUAAG -59
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