MirGeneDB ID | Dya-Mir-964-v2 |
Family name |
MIR-964 (all species) |
Seed |
AGAAUAG |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
|
Paralogues |
Dya-Mir-964-v1
|
Orthologues |
Dan-Mir-964
Dme-Mir-964-v2
Dmo-Mir-964
Dsi-Mir-964-v2
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13551084-13551142 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAAUCAAUGAAAUCUUGGUCCCACUUGUCUUAGAAUAGGGGAGCUUAACUUAUGUAUAUCAUGUAUAAGUUAAGAACCUUUAUUCUAAGACAAUUCGACUACAAAAUCAACUGAAAAAC
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|
Structure | 10 20 30 40 50
CAAUCAAUGAAAUCUUG---| CCAC AG UGUAUA
GUC UUGUCUUAGAAUAGGGG CUUAACUUA \
CAG AACAGAAUCUUAUUUCC GAAUUGAAU U
CAAAAAGUCAACUAAAACAU^ CUU- AA AUGUAC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UGUG in loop |
Tissue expression
|
|
Mature sequence |
Dya-Mir-964-v2_5p |
mirBase accession | None |
Sequence |
0- UAGAAUAGGGGAGCUUAACUUA -22
Get sequence
|
Star sequence |
Dya-Mir-964-v2_3p* (predicted) |
mirBase accession | None |
Sequence |
37- AGUUAAGAACCUUUAUUCUAAG -59
Get sequence
|