Mir-124-P2-v2

MirGeneDB ID

Ete-Mir-124-P2-v2

Family name

MIR-124 (all species)

Seed

UAAGGCA

Species

Lesser hedgehog tenrec (Echinops telfairi)

MiRBase ID

Paralogues

Ete-Mir-124-P1-v1 Ete-Mir-124-P1-v2 Ete-Mir-124-P2-v1

Orthologues

Aae-Mir-124 Aca-Mir-124-P2-v1 Aca-Mir-124-P2-v2 Ami-Mir-124-P2-v1 Ami-Mir-124-P2-v2 Asu-Mir-124 Bfl-Mir-124 Bge-Mir-124 Bla-Mir-124 Bta-Mir-124-P2-v1 Bta-Mir-124-P2-v2 Cel-Mir-124 Cfa-Mir-124-P2-v1 Cfa-Mir-124-P2-v2 Cmi-Mir-124-P2-v1 Cmi-Mir-124-P2-v2 Cpi-Mir-124-P2-v1 Cpi-Mir-124-P2-v2 Cpo-Mir-124-P2-v1 Cpo-Mir-124-P2-v2 Cte-Mir-124 Dan-Mir-124 Dma-Mir-124 Dme-Mir-124 Dmo-Mir-124 Dno-Mir-124-P2-v1 Dno-Mir-124-P2-v2 Dpu-Mir-124 Dre-Mir-124-P2a-v1 Dre-Mir-124-P2a-v2 Dsi-Mir-124 Dya-Mir-124 Esc-Mir-124 Gga-Mir-124-P2-v1 Gga-Mir-124-P2-v2 Gja-Mir-124-P2-v1 Gja-Mir-124-P2-v2 Hme-Mir-124 Hsa-Mir-124-P2-v1 Hsa-Mir-124-P2-v2 Isc-Mir-124 Lan-Mir-124 Lch-Mir-124-P2 Loc-Mir-124-P2-v1 Loc-Mir-124-P2-v2 Mal-Mir-124-P2a-v1 Mal-Mir-124-P2a-v2 Mdo-Mir-124-P2-v1 Mdo-Mir-124-P2-v2 Mml-Mir-124-P2-v1 Mml-Mir-124-P2-v2 Mmu-Mir-124-P2-v1 Mmu-Mir-124-P2-v2 Mun-Mir-124-P2-v1 Mun-Mir-124-P2-v2 Npo-Mir-124 Obi-Mir-124 Ocu-Mir-124-P2-v1 Ocu-Mir-124-P2-v2 Ovu-Mir-124 Pbv-Mir-124-P2-v1 Pbv-Mir-124-P2-v2 Pfl-Mir-124 Pma-Mir-124-o2 Pmi-Mir-124 Rno-Mir-124-P2-v1 Rno-Mir-124-P2-v2 Sha-Mir-124-P2-v1 Sha-Mir-124-P2-v2 Sko-Mir-124 Spt-Mir-124-P2 Spu-Mir-124 Sto-Mir-124-P2-v1 Sto-Mir-124-P2-v2 Tca-Mir-124 Tgu-Mir-124-P2-v1 Tgu-Mir-124-P2-v2 Tni-Mir-124-P2a-v1 Tni-Mir-124-P2a-v2 Tni-Mir-124-P2b-v1 Tni-Mir-124-P2b-v2 Xbo-Mir-124 Xla-Mir-124-P2c-v1 Xla-Mir-124-P2c-v2 Xla-Mir-124-P2d-v1 Xla-Mir-124-P2d-v2 Xtr-Mir-124-P2-v1 Xtr-Mir-124-P2-v2

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(echTel2)

JH980320: 18619091-18619150 [-] UCSC

Precursor
(pre-Mir +30nt flank)

UUCCUUCGCCAGGAGAAAGGCCUCUCUCUCCGUGUUCACAGCGGACCUUGAUUUAAAUGUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAAUGGGGCUGGCUGAGCACCGUCGGUCC

Get precursor sequence

Structure

        10         20        30        40        50          
UUCCUUCGCCAGGAGAAA-|     UC   CC        A   GA        UAAAUG 
                   GGCCUC  UCU  GUGUUCAC GCG  CCUUGAUU      \
                   UCGGGG  AGA  CGUAAGUG CGC  GGAAUUAA      U
CCUGGCUGCCACGAGUCGG^     UA   AC        G   AC        CAUACC 
.       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

Tissue expression

To

Star sequence

Ete-Mir-124-P2-v2_5p*

mirBase accession

None

Sequence

0- CGUGUUCACAGCGGACCUUGAUU -23

Get sequence

Mature sequence

Ete-Mir-124-P2-v2_3p

mirBase accession

None

Sequence

38- UUAAGGCACGCGGUGAAUGCCA -60

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