MirGeneDB ID | Ete-Mir-154-P14 |
Family name |
MIR-154 (all species) |
Seed |
GGUCGAC |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-154-P1
Ete-Mir-154-P2-v1
Ete-Mir-154-P2-v2
Ete-Mir-154-P3a-v1
Ete-Mir-154-P3a-v2
Ete-Mir-154-P4a
Ete-Mir-154-P4b
Ete-Mir-154-P5
Ete-Mir-154-P6
Ete-Mir-154-P7
Ete-Mir-154-P8
Ete-Mir-154-P9
Ete-Mir-154-P10
Ete-Mir-154-P12
Ete-Mir-154-P13
Ete-Mir-154-P16
Ete-Mir-154-P17
Ete-Mir-154-P18
Ete-Mir-154-P19
Ete-Mir-154-P20-v1
Ete-Mir-154-P20-v2
Ete-Mir-154-P21
Ete-Mir-154-P22
Ete-Mir-154-P24
Ete-Mir-154-P25
Ete-Mir-154-P26
Ete-Mir-154-P27
Ete-Mir-154-P28
Ete-Mir-154-P29
Ete-Mir-154-P30
Ete-Mir-154-P31
Ete-Mir-154-P32
Ete-Mir-154-P36
|
Orthologues |
Bta-Mir-154-P14
Cfa-Mir-154-P14
Cpo-Mir-154-P14
Dno-Mir-154-P14
Hsa-Mir-154-P14
Mml-Mir-154-P14
Mmu-Mir-154-P14
Rno-Mir-154-P14
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980297: 82277759-82277814 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
UGCCACAACGCUCUGGGGUACGGGGAUGGCUGGUCGACCAGUUGGAAAGUAAUUUUUUAUAAUGUAUUUCACCUGGUCCACUAGCCAUCAGUGCCCACUGCAGCCUGCCGGGACCG
Get precursor sequence
|
Structure | 10 20 30 40 50
UGCCACAACGCUCUGGGGUAC ----| C U AG AUUUU
GGG GAUGGCUGGU GACCAG UGGAA UA \
CCC CUACCGAUCA CUGGUC ACUUU GU U
GCCAGGGCCGUCCGACGUCA- GUGA^ C C AU AAUAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Ete-Mir-154-P14_5p |
mirBase accession | None |
Sequence |
0- UGGUCGACCAGUUGGAAAGUAAU -23
Get sequence
|
Star sequence |
Ete-Mir-154-P14_3p* |
mirBase accession | None |
Sequence |
34- UAUUUCACCUGGUCCACUAGCC -56
Get sequence
|