MirGeneDB ID | Ete-Mir-24-P2 |
Family name |
MIR-24 (all species) |
Seed |
GGCUCAG |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-24-P3
|
Orthologues |
Aca-Mir-24-P2
Ami-Mir-24-P2
Bta-Mir-24-P2
Cfa-Mir-24-P2
Cmi-Mir-24-P2
Cpi-Mir-24-P2
Cpo-Mir-24-P2
Dno-Mir-24-P2
Dre-Mir-24-P2a
Dre-Mir-24-P2b
Gga-Mir-24-P2
Gmo-Mir-24-P2b
Hsa-Mir-24-P2
Lch-Mir-24-P2
Loc-Mir-24-P2
Mdo-Mir-24-P2
Mml-Mir-24-P2
Mmu-Mir-24-P2
Mun-Mir-24-P2
Oan-Mir-24-P2
Ocu-Mir-24-P2
Pbv-Mir-24-P2
Rno-Mir-24-P2
Sha-Mir-24-P2
Spt-Mir-24-P2
Sto-Mir-24-P2
Tgu-Mir-24-P2
Tni-Mir-24-P2b
Xla-Mir-24-P2c
Xla-Mir-24-P2d
Xtr-Mir-24-P2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (echTel2) |
JH980384: 3444858-3444917 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CUGCGGGCUGUCAUUUGGACCCGUCCUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUCACACACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCUAGAGCAAAAAGACUUCCC
Get precursor sequence
|
Structure | 10 20 30 40 50
CUGCGGGCUGUCAUUUGGACC---| UC G G A UA UCUCAU
CG CUCC GU CCU CUGAGCUGA UCAGU \
GC GAGG CA GGA GACUUGACU GGUCA U
CCCUUCAGAAAAACGAGAUCCCGA^ U- A A C C- CACACU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Ete-Mir-24-P2_5p* |
mirBase accession | None |
Sequence |
0- GUGCCUACUGAGCUGAUAUCAGU -23
Get sequence
|
Mature sequence |
Ete-Mir-24-P2_3p |
mirBase accession | None |
Sequence |
38- UGGCUCAGUUCAGCAGGAACAG -60
Get sequence
|