MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-29-P2b

Family name MIR-29 (all species)
Seed AGCACCA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-29a
Paralogues Mmu-Mir-29-P1b-v1  Mmu-Mir-29-P1b-v2  Mmu-Mir-29-P1d-v1  Mmu-Mir-29-P1d-v2  Mmu-Mir-29-P2d 
Orthologues Aca-Mir-29-P2b  Ami-Mir-29-P2b  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Bta-Mir-29-P2b  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cfa-Mir-29-P2b  Cgi-Mir-29-P2  Cin-Mir-29-P2  Cli-Mir-29-P2b  Cmi-Mir-29-P2b  Cpi-Mir-29-P2b  Cpo-Mir-29-P2b  Csc-Mir-29-P2  Cte-Mir-29-P2  Dno-Mir-29-P2b  Dre-Mir-29-P2b1  Esc-Mir-29-P2  Ete-Mir-29-P2b  Gga-Mir-29-P2b  Gja-Mir-29-P2b  Gmo-Mir-29-P2b1  Hsa-Mir-29-P2b  Isc-Mir-29-P2  Lch-Mir-29-P2b  Lgi-Mir-29-P2  Loc-Mir-29-P2b  Mal-Mir-29-P2b1-v1  Mal-Mir-29-P2b1-v2  Mdo-Mir-29-P2b  Mml-Mir-29-P2b  Mun-Mir-29-P2b  Npo-Mir-29-P2  Oan-Mir-29-P2b  Obi-Mir-29-P2  Ocu-Mir-29-P2b  Ovu-Mir-29-P2  Pbv-Mir-29-P2b  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Rno-Mir-29-P2b  Sha-Mir-29-P2b  Sko-Mir-29-P2  Spt-Mir-29-P2b  Spu-Mir-29-P2  Sto-Mir-29-P2b  Tgu-Mir-29-P2b  Tni-Mir-29-P2b1  Xbo-Mir-29-P2  Xla-Mir-29-P2b3  Xla-Mir-29-P2b4  Xtr-Mir-29-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(mm10)		 chr6: 31062673-31062732 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-29-P2b)		 Mir-29-P2b chr6: 31062673-31062732 [-] UCSC Ensembl
Mir-29-P1b-v1 chr6: 31063025-31063088 [-] UCSC Ensembl
Mir-29-P1b-v2 chr6: 31063026-31063087 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAUGACCUCUUGUGACCCCUUAGAGGAUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAGAAUUUUCUAGCACCAUCUGAAAUCGGUUAUAAUGAUUGGGGAAGAGCACCGUUCAGCUG
Get precursor sequence
Structure
        10         20         30        40        50          
ACAUGACCUCUUGUGAC-    UAGAGG-|           UUU       C   GUCAAU 
                  CCCU       AUGACUGAUUUC   UGGUGUU AGA      \
                  GGGG       UAUUGGCUAAAG   ACCACGA UCU      A
GUCGACUUGCCACGAGAA    UUAGUAA^           UCU       -   UUUAAG 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-29-P2b_5p*
mirBase accessionMIMAT0004631
Sequence 
0- ACUGAUUUCUUUUGGUGUUCAGA -23
Get sequence
Proposed targets microrna.org: MIMAT0004631
TargetScanVert: mmu-miR-29a-5p
miRDB: MIMAT0004631
Mature sequence

Mmu-Mir-29-P2b_3p
mirBase accessionMIMAT0000535
Sequence 
38- UAGCACCAUCUGAAAUCGGUUA -60
Get sequence
Proposed targets microrna.org: MIMAT0000535
TargetScanVert: mmu-miR-29a-3p
miRDB: MIMAT0000535