MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-3073-as

Family name MIR-3073 (all species)
Seed UGGUCAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3073b
Paralogues Mmu-Mir-3073 
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr12: 112109250-112109309 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3073-as)		 Mir-3073-as chr12: 112109250-112109309 [-] UCSC Ensembl
Mir-3073 chr12: 112109252-112109311 [+] UCSC Ensembl
Mir-203-v1 chr12: 112130889-112130948 [+] UCSC Ensembl
Mir-203-v2 chr12: 112130889-112130948 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCCACCUGGCCUCCUGCUGGCCUGCACUAUGGUCACAGUGGACAUCAACCCAUCUAGACUCUAGGGCUGGCGCCAACUGUGACCACUGGGCAGGAACAGCUUUGGCUACUCCGUGCAG
Get precursor sequence
Structure
        10         20         30         40         50         
CCUCCACCUGGCCUCCU-    G-     A   -         -|  ACA   A  CAUCUA 
                  GCUG  CCUGC CUA UGGUCACAG UGG   UCA CC      G
                  CGAC  GGACG GGU ACCAGUGUC ACC   GGU GG      A
GACGUGCCUCAUCGGUUU    AA     -   C         A^  GC-   C  GAUCUC 
.       110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-3073-as_5p
mirBase accessionMIMAT0022375
Sequence 
0- AUGGUCACAGUGGACAUCAACC -22
Get sequence
Proposed targets TargetScanVert: mmu-miR-3073b-5p
miRDB: MIMAT0022375
Star sequence

Mmu-Mir-3073-as_3p*
mirBase accessionMIMAT0022376
Sequence 
38- CUGGCGCCAACUGUGACCACUG -60
Get sequence
Proposed targets TargetScanVert: mmu-miR-3073b-3p
miRDB: MIMAT0022376