MirGeneDB 2.1
MirGeneDB ID

Dmo-Mir-1

Family name MIR-1 (all species)
Seed GGAAUGU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-1
Paralogues
Orthologues Aae-Mir-1  Aca-Mir-1-P1  Aca-Mir-1-P2  Aca-Mir-1-P3  Aca-Mir-1-P4  Ami-Mir-1-P1  Ami-Mir-1-P2  Ami-Mir-1-P3  Ami-Mir-1-P4  Asu-Mir-1  Bfl-Mir-1  Bge-Mir-1  Bla-Mir-1  Bpl-Mir-1-P22  Bpl-Mir-1-P23  Bta-Mir-1-P1  Bta-Mir-1-P2  Bta-Mir-1-P3  Cbr-Mir-1  Cel-Mir-1  Cfa-Mir-1-P1  Cfa-Mir-1-P2  Cfa-Mir-1-P3  Cgi-Mir-1  Cin-Mir-1  Cli-Mir-1-P1  Cli-Mir-1-P2  Cli-Mir-1-P3  Cli-Mir-1-P4  Cmi-Mir-1-P1  Cmi-Mir-1-P3  Cmi-Mir-1-P4  Cpi-Mir-1-P1  Cpi-Mir-1-P2  Cpi-Mir-1-P3  Cpi-Mir-1-P4  Cpo-Mir-1-P1  Cpo-Mir-1-P2  Cpo-Mir-1-P3  Csc-Mir-1-P18a  Csc-Mir-1-P18b  Csc-Mir-1-P19  Cte-Mir-1  Dan-Mir-1  Dma-Mir-1  Dme-Mir-1  Dno-Mir-1-P1  Dno-Mir-1-P2  Dno-Mir-1-P3  Dpu-Mir-1  Dre-Mir-1-P1  Dre-Mir-1-P2a  Dre-Mir-1-P2b  Dre-Mir-1-P3  Dsi-Mir-1  Dya-Mir-1  Ebu-Mir-1-P5  Ebu-Mir-1-P6a  Ebu-Mir-1-P6b  Ebu-Mir-1-P7  Ebu-Mir-1-P8  Efe-Mir-1-P9  Efe-Mir-1-P10  Efe-Mir-1-P11  Efe-Mir-1-P12  Esc-Mir-1  Ete-Mir-1-P1  Ete-Mir-1-P2  Ete-Mir-1-P3  Gga-Mir-1-P1  Gga-Mir-1-P2  Gga-Mir-1-P3  Gga-Mir-1-P4  Gja-Mir-1-P1  Gja-Mir-1-P2e  Gja-Mir-1-P2f  Gja-Mir-1-P3  Gja-Mir-1-P4c  Gja-Mir-1-P4d  Gmo-Mir-1-P1  Gmo-Mir-1-P2a  Gmo-Mir-1-P3  Hme-Mir-1  Hsa-Mir-1-P1  Hsa-Mir-1-P2  Hsa-Mir-1-P3  Isc-Mir-1  Lan-Mir-1  Lch-Mir-1-P1  Lch-Mir-1-P2  Lch-Mir-1-P3  Lch-Mir-1-P4  Lgi-Mir-1  Loc-Mir-1-P1  Loc-Mir-1-P2  Loc-Mir-1-P3  Lpo-Mir-1-P13  Lpo-Mir-1-P14  Lpo-Mir-1-P15  Lpo-Mir-1-P16  Lpo-Mir-1-P17  Mal-Mir-1-P1  Mal-Mir-1-P2a  Mal-Mir-1-P3  Mdo-Mir-1-P1  Mdo-Mir-1-P2  Mdo-Mir-1-P3  Mml-Mir-1-P1  Mml-Mir-1-P2  Mml-Mir-1-P3  Mmu-Mir-1-P1  Mmu-Mir-1-P2  Mmu-Mir-1-P3  Mun-Mir-1-P1  Mun-Mir-1-P2  Mun-Mir-1-P3  Mun-Mir-1-P4  Npo-Mir-1-P20  Npo-Mir-1-P21  Oan-Mir-1-P1  Oan-Mir-1-P2  Oan-Mir-1-P3  Oan-Mir-1-P4  Obi-Mir-1  Ocu-Mir-1-P1  Ocu-Mir-1-P2  Ocu-Mir-1-P3  Ovu-Mir-1  Pbv-Mir-1-P1  Pbv-Mir-1-P2  Pbv-Mir-1-P3  Pbv-Mir-1-P4  Pfl-Mir-1  Pma-Mir-1-o1  Pma-Mir-1-o2  Pma-Mir-1-o3  Pma-Mir-1-o4  Pmi-Mir-1  Rno-Mir-1-P1  Rno-Mir-1-P2  Rno-Mir-1-P3  Sha-Mir-1-P1  Sha-Mir-1-P2  Sha-Mir-1-P3  Sko-Mir-1  Sme-Mir-1-P24  Sme-Mir-1-P25  Sme-Mir-1-P26  Spt-Mir-1-P1  Spt-Mir-1-P2  Spt-Mir-1-P3  Spt-Mir-1-P4  Spu-Mir-1  Sto-Mir-1-P1  Sto-Mir-1-P3  Sto-Mir-1-P4  Tca-Mir-1  Tgu-Mir-1-P1  Tgu-Mir-1-P2  Tgu-Mir-1-P3  Tgu-Mir-1-P4  Tni-Mir-1-P1  Tni-Mir-1-P2a  Tni-Mir-1-P3  Xbo-Mir-1  Xla-Mir-1-P1a  Xla-Mir-1-P1b  Xla-Mir-1-P2c  Xla-Mir-1-P2d  Xla-Mir-1-P3a  Xla-Mir-1-P3b  Xla-Mir-1-P4a  Xla-Mir-1-P4b  Xtr-Mir-1-P1  Xtr-Mir-1-P2  Xtr-Mir-1-P3  Xtr-Mir-1-P4 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Dmoj_caf1)		 scaffold_6500: 24555202-24555262 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUAAAUUGUUCAUUGCGCCUUUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUUUAUAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUCUGGCGAAGCAUCAUACCAAACUG
Get precursor sequence
Structure
        10          20        30        40        50          
CUUAAAUUGUUCAUUGC--|  UUUGAGA            C        A   GUAUUUA 
                   GCC       GUUCCAUGCUUC UUGCAUUC AUA       \
                   CGG       CGAGGUAUGAAG AAUGUAAG UAU       U
GUCAAACCAUACUACGAAG^  UCUAAAG            A        G   ACGAAUA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em Fe Ma Ma
Star sequence

Dmo-Mir-1_5p*
mirBase accessionNone
Sequence 
0- CCAUGCUUCCUUGCAUUCAAUA -22
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Mature sequence

Dmo-Mir-1_3p
mirBase accessionMIMAT0008694
Sequence 
39- UGGAAUGUAAAGAAGUAUGGAG -61
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